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A DFT study of the endo -selectivity mechanism of the Diels-Alder reaction in lindenane dimeric sesquiterpene synthesis promoted by pyridines.

Yuxin LiRong ZhangYuling SongHujun XieRuibo Wu
Published in: Physical chemistry chemical physics : PCCP (2023)
The lindenane dimeric sesquiterpenoids with versatile biological activities are accessible via biometric synthesis, in which the endo -selective Diels-Alder reaction plays an important role. To explore the endo -selectivity of the Diels-Alder reaction between lindenane sesquiterpenes promoted by pyridines, density functional theory (DFT) calculations were performed to explore the reaction mechanism between pyridines and D-A monomers. The calculations performed on the reaction pathways explain why pyridines can promote endo -selectivity via hydrogen bonding, and the hydrogen bond strength is a key factor driving the Diels-Alder reaction in major biochemical systems. These DFT-level insights will pave the way for designing better promoters for Diels-Alder reactions in biometric synthesis applications.
Keyphrases
  • density functional theory
  • molecular dynamics
  • molecular docking
  • molecular dynamics simulations
  • crystal structure