Ruibo Wu

ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 22

Top Topics

Oxide Nanoparticles

Structural Basis

Molecular Dynamics

Top Venues

Physical chemistry chemical physics : PCCP

Journal of chemical information and modeling

Chemical science

This page only lists publications with an associated author ORCID identifier.

Publications

Haiyan Han, Ping Zhang, Zhekai Xie, Jian-Zhao Qi, Pengchao Wang, Chang Li, Zheyong Xue, Ruibo Wu, Chengwei Liu
Functional Characterization of Sesquiterpene Synthases and P450 Enzymes in Flammulina velutipes for Biosynthesis of Spiro [4.5] Decane Terpene. Journal of agricultural and food chemistry (2024)
Xiaojuan Shen, Tao Zeng, Nianhang Chen, Jiabo Li, Ruibo Wu
NIMO: A Natural Product-Inspired Molecular Generative Model Based on Conditional Transformer. Molecules (Basel, Switzerland) 29 (8) (2024)
Tao Zeng, Zhehao Jin, Shuangjia Zheng, Tao Yu, Ruibo Wu
Developing BioNavi for Hybrid Retrosynthesis Planning. JACS Au 4 (7) (2024)
Weiyan Zhang, Kaitong Peng, Keying Lan, Kangwei Xu, Ruibo Wu, Tom Hsiang, Shao-Ping Nie, Lixin Zhang, Xinye Wang, Xueting Liu
Serine 85 functions as a catalytic acid in the reprotonation process during EvAS-catalyzed astellifadiene biosynthesis. Chemical communications (Cambridge, England) (2024)
Tao Zeng, Zhehao Jin, Shuangjia Zheng, Tao Yu, Ruibo Wu
Developing BioNavi for Hybrid Retrosynthesis Planning. JACS Au 4 (7) (2024)
Xiaojuan Shen, Tao Zeng, Nianhang Chen, Jiabo Li, Ruibo Wu
NIMO: A Natural Product-Inspired Molecular Generative Model Based on Conditional Transformer. Molecules (Basel, Switzerland) 29 (8) (2024)
Yuxin Li, Rong Zhang, Yuling Song, Hujun Xie, Ruibo Wu
A DFT study of the endo -selectivity mechanism of the Diels-Alder reaction in lindenane dimeric sesquiterpene synthesis promoted by pyridines. Physical chemistry chemical physics : PCCP (2023)
Fan Zhang, Yunpeng Wang, Jingyang Yue, Rongrong Zhang, Yong-Er Hu, Ruoshi Huang, Ai-Jia Ji, B Andes Hess, Zhongqiu Liu, Lixin Duan, Ruibo Wu
Discovering a uniform functional trade-off of the CBC-type 2,3-oxidosqualene cyclases and deciphering its chemical logic. Science advances 9 (23) (2023)
Yuxin Li, Rong Zhang, Yuling Song, Hujun Xie, Ruibo Wu
A DFT study of the endo -selectivity mechanism of the Diels-Alder reaction in lindenane dimeric sesquiterpene synthesis promoted by pyridines. Physical chemistry chemical physics : PCCP 25 (5) (2023)
Dong Fang, Zhiyang Zhang, Jihang Zhai, Baolin Guo, Pengfei Li, Xiaoyuan Liu, Jin-Shuai Song, Songqiang Xie, Ruibo Wu, Yuan Zhao, Chaojie Wang
Enzymatic-related network of catalysis, polyamine, and tumors for acetylpolyamine oxidase: from calculation to experiment. Chemical science 15 (8) (2023)
Yuxin Li, Rong Zhang, Yuling Song, Hujun Xie, Ruibo Wu
A DFT study of the endo -selectivity mechanism of the Diels-Alder reaction in lindenane dimeric sesquiterpene synthesis promoted by pyridines. Physical chemistry chemical physics : PCCP 25 (5) (2023)
Dong Fang, Zhiyang Zhang, Jihang Zhai, Baolin Guo, Pengfei Li, Xiaoyuan Liu, Jin-Shuai Song, Songqiang Xie, Ruibo Wu, Yuan Zhao, Chaojie Wang
Enzymatic-related network of catalysis, polyamine, and tumors for acetylpolyamine oxidase: from calculation to experiment. Chemical science 15 (8) (2023)
Fan Zhang, Tao Zeng, Ruibo Wu
QM/MM Modeling Aided Enzyme Engineering in Natural Products Biosynthesis. Journal of chemical information and modeling (2023)
Tao Zeng, Yuxinxin Chen, Yongxing Jian, Fan Zhang, Ruibo Wu
Chemotaxonomic investigation of plant terpenoids with an established database (TeroMOL). The New phytologist 235 (2) (2022)
Tao Zeng, Zhihong Liu, Jingyuan Zhuang, Yitao Jiang, Wengan He, Hongjuan Diao, Nan Lv, Yongxing Jian, Danhong Liang, Yufan Qiu, Rong Zhang, Fan Zhang, Xiaowen Tang, Ruibo Wu
TeroKit: A Database-Driven Web Server for Terpenome Research. Journal of chemical information and modeling 60 (4) (2020)
Xiaowen Tang, Fan Zhang, Tao Zeng, Wei Li, Sheng Yin, Ruibo Wu
Enzymatic Plasticity Inspired by the Diterpene Cyclase CotB2. ACS chemical biology 15 (10) (2020)
Jingyuan Zhuang, Fan Zhang, Jingwei Zhou, Wenbin Deng, Ruibo Wu
Residue-Orientation-Dependent Dynamics and Selectivity of Active Pocket in Microbe Class I Terpene Cyclases. Journal of chemical information and modeling 60 (10) (2020)
Shidan Wu, Fan Zhang, Wenbo Xiong, István Molnár, Jincai Liang, Aijia Ji, Caixia Wang, Shengliang Wang, Zhongqiu Liu, Ruibo Wu, Lixin Duan
An Unexpected Oxidosqualene Cyclase Active Site Architecture in the Iris tectorum Multifunctional α-Amyrin Synthase. ACS catalysis 10 (16) (2020)
Huawei Liu, Fan Zhang, Kai Wang, Xiaowen Tang, Ruibo Wu
Conformational dynamics and allosteric effect modulated by the unique zinc-binding motif in class IIa HDACs. Physical chemistry chemical physics : PCCP 21 (23) (2019)
Tao Zeng, Zhihong Liu, Huawei Liu, Wengan He, Xiaowen Tang, Liwei Xie, Ruibo Wu
Exploring Chemical and Biological Space of Terpenoids. Journal of chemical information and modeling 59 (9) (2019)
Nan Lyu, Kai Wang, Fan Zhang, Haimei Qin, Yi Zhao, Ruibo Wu, Yu-Bing Si, Laiyou Wang
Recognition of PDL1/L2 by different induced-fit mechanisms of PD1: a comparative study of molecular dynamics simulations. Physical chemistry chemical physics : PCCP 22 (3) (2019)
Jingwei Zhou, Yue Huang, Chunyan Cheng, Kai Wang, Ruibo Wu
Intrinsic Dynamics of the Binding Rail and Its Allosteric Effect in the Class I Histone Deacetylases. Journal of chemical information and modeling 57 (9) (2017)