Prognostic implication and functional annotations of Rad50 expression in patients with prostate cancer.
Wen-Hao XuJun WangHao-Yue ShengYuan-Yuan QuHong-Kai WangYu ZhuGuo-Hai ShiHai-Liang ZhangDing-Wei YePublished in: Journal of cellular biochemistry (2019)
Increasing evidence has shown that Rad50, a protein involved in the DNA damage repair process, significantly correlated with tumor prognosis. This study focused on Rad50 expression in tumor samples and its prognostic value for patients with prostate cancer (PCa). In this study, significantly elevated Rad50 expression in PCa tissues compared to normal tissues (P < .01). Five independent Oncomine databases validated significant differential expression of Rad50 (P < .001). Hence, 80 patients with PCa from Fudan University Shanghai Cancer Center (FUSCC) and 351 patients with PCa with available protein expression data from The Cancer Genome Atlas (TCGA) were included to investigate the survival benefit. Univariate and multivariate Cox regression analyses were performed to investigate the significance of clinicopathological factors on disease-free survival (DFS) and overall survival (OS). Kaplan-Meier analysis indicated that elevated Rad50 protein expression levels significantly correlated with unfavorable DFS (P = .005) in the FUSCC cohort and poorer OS (P = .04) in TCGA cohort. Furthermore, coregulation analysis of proteins indicated that 76 coregulated proteins were associated with Rad50, while 11 most highly involved hub proteins, including Rad50, MRE11A, DUT, POLR3A, MCM3AP, RECQL, PNPT1, RANBP3, DDX1, SNRPB, and UGN, were significantly coregulated in the protein-protein interaction network. Functional enrichment analysis consecutively indicated significant functions and signaling pathways including DNA replication, spliceosome, DNA geometric change, homologous recombination, and G2M checkpoint. This study first reveals that elevated Rad50 expression is significantly associated with aggressive progression and poor survival for patients with PCa. Together, these data suggest that Rad50 may act as an oncoprotein, guide the molecular diagnosis, and may shed light on novel individual therapeutic strategies for progressive PCa patients.
Keyphrases
- dna damage
- dna repair
- prostate cancer
- free survival
- poor prognosis
- oxidative stress
- protein protein
- small molecule
- signaling pathway
- end stage renal disease
- gene expression
- multiple sclerosis
- papillary thyroid
- big data
- young adults
- machine learning
- newly diagnosed
- electronic health record
- single cell
- data analysis
- epithelial mesenchymal transition
- chronic kidney disease
- peritoneal dialysis
- squamous cell carcinoma
- long non coding rna
- patient reported outcomes
- induced apoptosis
- cell proliferation
- cell free