Pulsed stimuli entrain p53 to synchronize single cells and modulate cell-fate determination.
Harish VenkatachalapathyZhilin YangSamira M AzarinCasim A SarkarEric BatchelorPublished in: bioRxiv : the preprint server for biology (2023)
The dynamic expression pattern of the tumor suppressor p53 can have significant cell-to-cell heterogeneity, leading to variability in cellular stress responses and resulting in clinical consequences such as cancer chemoresistance. Using a combination of mathematical modeling, time-lapse fluorescence microscopy, and single-cell tracking, we exploit the oscillatory nature of the p53 response to DNA double-strand break (DSB) induction to reduce cellular heterogeneity by entraining p53 dynamics. Our study demonstrates that oscillatory p53 dynamics can be experimentally entrained over a wider range of DSB frequencies than predicted by an established computational model for this system. Non-intuitively, we determined that recapitulating this increased entrainment range required a modified model with a less robust oscillator and wider steady-state valley on the energy landscape. Further, we show that p53 entrainment can lead to altered expression dynamics of downstream targets responsible for cell fate in a manner dependent on target mRNA stability. Overall, this study exemplifies the potential of externally entraining p53 dynamics to reduce cellular variability and synchronize cell-fate responses to genotoxic agents.
Keyphrases
- cell fate
- single cell
- rna seq
- high throughput
- poor prognosis
- single molecule
- high frequency
- induced apoptosis
- cell therapy
- high resolution
- stem cells
- oxidative stress
- binding protein
- risk assessment
- circulating tumor
- cell death
- mesenchymal stem cells
- endoplasmic reticulum stress
- papillary thyroid
- cell free
- solid phase extraction
- label free
- circulating tumor cells