Astrocytes Drive Divergent Metabolic Gene Expression in Humans and Chimpanzees.
Trisha M ZintelJason PizzolloChristopher G ClaypoolCourtney C BabbittPublished in: Genome biology and evolution (2024)
The human brain utilizes ∼20% of all of the body's metabolic resources, while chimpanzee brains use <10%. Although previous work shows significant differences in metabolic gene expression between the brains of primates, we have yet to fully resolve the contribution of distinct brain cell types. To investigate cell type-specific interspecies differences in brain gene expression, we conducted RNA-seq on neural progenitor cells, neurons, and astrocytes generated from induced pluripotent stem cells from humans and chimpanzees. Interspecies differential expression analyses revealed that twice as many genes exhibit differential expression in astrocytes (12.2% of all genes expressed) than neurons (5.8%). Pathway enrichment analyses determined that astrocytes, rather than neurons, diverged in expression of glucose and lactate transmembrane transport, as well as pyruvate processing and oxidative phosphorylation. These findings suggest that astrocytes may have contributed significantly to the evolution of greater brain glucose metabolism with proximity to humans.
Keyphrases
- gene expression
- single cell
- rna seq
- dna methylation
- white matter
- resting state
- spinal cord
- induced pluripotent stem cells
- genome wide
- poor prognosis
- cerebral ischemia
- multiple sclerosis
- genome wide identification
- metabolic syndrome
- spinal cord injury
- bone marrow
- electron transfer
- transcription factor
- bioinformatics analysis
- skeletal muscle
- subarachnoid hemorrhage
- genome wide analysis