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New Thiazolidine-4-One Derivatives as SARS-CoV-2 Main Protease Inhibitors.

Antonella MessorePaolo MaluneElisa PatacchiniValentina Noemi MadiaDavide IalongoMerve ArpaciogluAurora AlbanoGiuseppe RuggieriFrancesco SaccolitiLuigi ScipioneEnzo TramontanoSerena CantonAngela CoronaSante ScognamiglioAnnalaura PaulisMustapha SuleimanHelmi Mohammed Al-MaqtariFatma Mohamed A AbidSarkar Mohammad Abe KawsarSankaranarayanan MurugesanRoberto Di SantoFrancesca EspositoRoberta Costi
Published in: Pharmaceuticals (Basel, Switzerland) (2024)
It has been more than four years since the first report of SARS-CoV-2, and humankind has experienced a pandemic with an unprecedented impact. Moreover, the new variants have made the situation even worse. Among viral enzymes, the SARS-CoV-2 main protease (M pro ) has been deemed a promising drug target vs. COVID-19. Indeed, M pro is a pivotal enzyme for viral replication, and it is highly conserved within coronaviruses. It showed a high extent of conservation of the protease residues essential to the enzymatic activity, emphasizing its potential as a drug target to develop wide-spectrum antiviral agents effective not only vs. SARS-CoV-2 variants but also against other coronaviruses. Even though the FDA-approved drug nirmatrelvir, a M pro inhibitor, has boosted the antiviral therapy for the treatment of COVID-19, the drug shows several drawbacks that hinder its clinical application. Herein, we report the synthesis of new thiazolidine-4-one derivatives endowed with inhibitory potencies in the micromolar range against SARS-CoV-2 M pro . In silico studies shed light on the key structural requirements responsible for binding to highly conserved enzymatic residues, showing that the thiazolidinone core acts as a mimetic of the Gln amino acid of the natural substrate and the central role of the nitro-substituted aromatic portion in establishing π-π stacking interactions with the catalytic His-41 residue.
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