SCELLECTOR: ranking amplification bias in single cells using shallow sequencing.

Vivekananda SarangiAlexandre JourdonTaejeong BaeArijit PandaFlora VaccarinoAlexej Abyzov

Published in: BMC bioinformatics (2020)

Scellector can potentially be used to rank amplifications obtained from single cell platforms relying on a MDA-like amplification step, such as Chromium Single Cell profiling solution.

Keyphrases

single cell
rna seq
cell cycle arrest
nucleic acid
induced apoptosis
high throughput
cell death
endoplasmic reticulum stress
cell proliferation