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allofus: an R package to facilitate use of the All of Us Researcher Workbench.

Louisa H SmithChristina Kravetz
Published in: Journal of the American Medical Informatics Association : JAMIA (2024)
We developed an initial set of functions that solve problems we experienced across survey and electronic health record data in our own research and in mentoring student projects. The package will continue to grow and develop with the All of Us Research Program. The allofus R package can help build community research capacity by increasing access to the All of Us Research Program data, the efficiency of its use, and the rigor and reproducibility of the resulting research.
Keyphrases
  • electronic health record
  • quality improvement
  • clinical decision support
  • mental health
  • adverse drug
  • healthcare
  • cross sectional
  • deep learning
  • medical students
  • data analysis