Draft genome assembly of Lactobacillus johnsonii UMB3423 from a voided urine sample.

While the urogenital microbiota of asymptomatic females is often dominated by species of Lactobacillus , Lactobacillus johnsonii is not a common member. It is more frequently found in the gastrointestinal tract. Here, we present the draft genome sequence of L. johnsonii UMB3423, which was isolated from a voided urine sample.