First Peek into the Transcriptomic Response in Heat-Stressed Tomato Inoculated with Septoglomus constrictum .
Viktor SzentpéteriEszter VirágZoltán MayerNguyen Hong DucGéza HegedűsKatalin PostaPublished in: Plants (Basel, Switzerland) (2024)
In this study, we report the interaction between an arbuscular mycorrhizal fungus, Septoglomus constrictum , and tomato plants under heat stress. For the first time, this interaction was studied by Illumina RNA-seq, followed by a comprehensive bioinformatic analysis that investigated root and leaf tissue samples. The genome-wide transcriptional profiling displayed fewer transcriptomic changes in the root under heat-stress conditions caused by S. constrictum . The top 50 DEGs suggested significant changes in the expression of genes encoding heat-shock proteins, transporter proteins, and genes of phytohormone metabolism involving jasmonic acid signalling. S. constrictum induced the upregulation of genes associated with pathways such as 'drought-responsive' and the 'development of root hair' in the root, as well as 'glycolipid desaturation', 'intracellular auxin transport', and 'ethylene biosynthesis' in the leaf. The pathways 'biotin biosynthesis' and 'threonine degradation' were found in both investigated tissue types. Expression analysis of transcription factors showed 2 and 11 upregulated transcription factors in heat-stressed root and leaf tissues, respectively. However, we did not find shared transcription factors. Heat-stressed arbuscular mycorrhizal plants suffered less oxidative stress when exposed to high temperatures. Colorimetric tests demonstrated less accumulation of H 2 O 2 and MDA in heat-stressed mycorrhizal plants. This phenomenon was accompanied by the higher expression of six stress genes that encode peroxidases, glutathione S-transferase and ubiquitin carboxyl-terminal hydrolase in roots and leaves. Our findings provide a new perspective on elucidating the functional metabolic processes of tomato plants under mycorrhizal-heat stressed conditions.
Keyphrases
- heat stress
- heat shock
- rna seq
- genome wide
- transcription factor
- poor prognosis
- single cell
- genome wide identification
- oxidative stress
- dna methylation
- gene expression
- long non coding rna
- binding protein
- diabetic rats
- gold nanoparticles
- atomic force microscopy
- hydrogen peroxide
- signaling pathway
- cell proliferation
- dna damage
- copy number
- nitric oxide
- drug delivery
- genome wide analysis
- ischemia reperfusion injury