Determinants of p53 DNA binding, gene regulation, and cell fate decisions.
Martin FischerMorgan A SammonsPublished in: Cell death and differentiation (2024)
The extent to which transcription factors read and respond to specific information content within short DNA sequences remains an important question that the tumor suppressor p53 is helping us answer. We discuss recent insights into how local information content at p53 binding sites might control modes of p53 target gene activation and cell fate decisions. Significant prior work has yielded data supporting two potential models of how p53 determines cell fate through its target genes: a selective target gene binding and activation model and a p53 level threshold model. Both of these models largely revolve around an analogy of whether p53 is acting in a "smart" or "dumb" manner. Here, we synthesize recent and past studies on p53 decoding of DNA sequence, chromatin context, and cellular signaling cascades to elicit variable cell fates critical in human development, homeostasis, and disease.
Keyphrases
- cell fate
- dna binding
- transcription factor
- genome wide identification
- genome wide
- single molecule
- circulating tumor
- endothelial cells
- cell free
- copy number
- dna damage
- dna methylation
- gene expression
- health information
- electronic health record
- cell therapy
- single cell
- genome wide analysis
- nucleic acid
- induced pluripotent stem cells
- big data
- mesenchymal stem cells
- risk assessment
- pluripotent stem cells
- artificial intelligence
- circulating tumor cells