Reticular Basement Membrane Thickness Is Associated with Growth- and Fibrosis-Promoting Airway Transcriptome Profile-Study in Asthma Patients.
Stanisława Bazan-SochaSylwia Buregwa-CzumaBogdan JakielaLech ZarebaIzabela ZawlikAleksander MyszkaJerzy SojaKrzysztof OkonJacek ZarychtaPaweł KozlikSylwia DziedzinaAgnieszka PadjasKrzysztof WojcikMichal KepskiJan G BazanPublished in: International journal of molecular sciences (2021)
Airway remodeling in asthma is characterized by reticular basement membrane (RBM) thickening, likely related to epithelial structural and functional changes. Gene expression profiling of the airway epithelium might identify genes involved in bronchial structural alterations. We analyzed bronchial wall geometry (computed tomography (CT)), RBM thickness (histology), and the bronchial epithelium transcriptome profile (gene expression array) in moderate to severe persistent (n = 21) vs. no persistent (n = 19) airflow limitation asthmatics. RBM thickness was similar in the two studied subgroups. Among the genes associated with increased RBM thickness, the most essential were those engaged in cell activation, proliferation, and growth (e.g., CDK20, TACC2, ORC5, and NEK5) and inhibiting apoptosis (e.g., higher mRNA expression of RFN34, BIRC3, NAA16, and lower of RNF13, MRPL37, CACNA1G). Additionally, RBM thickness correlated with the expression of genes encoding extracellular matrix (ECM) components (LAMA3, USH2A), involved in ECM remodeling (LTBP1), neovascularization (FGD5, HPRT1), nerve functioning (TPH1, PCDHGC4), oxidative stress adaptation (RIT1, HSP90AB1), epigenetic modifications (OLMALINC, DNMT3A), and the innate immune response (STAP1, OAS2). Cluster analysis revealed that genes linked with RBM thickness were also related to thicker bronchial walls in CT. Our study suggests that the pro-fibrotic profile in the airway epithelial cell transcriptome is associated with a thicker RBM, and thus, may contribute to asthma airway remodeling.
Keyphrases
- genome wide
- gene expression
- optical coherence tomography
- extracellular matrix
- dna methylation
- computed tomography
- immune response
- single cell
- oxidative stress
- chronic obstructive pulmonary disease
- rna seq
- lung function
- positron emission tomography
- image quality
- contrast enhanced
- end stage renal disease
- signaling pathway
- magnetic resonance imaging
- allergic rhinitis
- systemic sclerosis
- poor prognosis
- ejection fraction
- mass spectrometry
- dna damage
- peritoneal dialysis
- diabetic retinopathy
- patient reported outcomes
- anti inflammatory
- chronic kidney disease
- long non coding rna
- air pollution
- vascular endothelial growth factor
- magnetic resonance
- toll like receptor
- diabetic rats
- dendritic cells
- drug induced
- duchenne muscular dystrophy