The genetic architecture of dog ownership: large-scale genome-wide association study in 97,552 European-ancestry individuals.
Tong GongRobert KarlssonShuyang YaoPatrik K E MagnussonOlesya AjnakinaAndrew SteptoeLaxmi BhattaBen BrumptonAshish KumarErik Mélennull nullKeng-Han LinChao TianTove FallCatarina AlmqvistPublished in: G3 (Bethesda, Md.) (2024)
Dog ownership has been associated with several complex traits and there is evidence of genetic influence. We performed a genome-wide association study of dog ownership through meta-analysis of 31,566 Swedish twins in five discovery cohorts and additional 65,986 European-ancestry individuals in three replication cohorts from Sweden, Norway, and the UK. Association test with >7.4 million single-nucleotide polymorphisms were meta-analyzed using a fixed effect model after controlling for population structure and relatedness. We identified two suggestive loci using discovery cohorts, which did not reach genome-wide significance after meta-analysis with replication cohorts. Single-nucleotide polymorphisms-based heritability of dog ownership using linkage disequilibrium score regression was estimated at 0.123 (CI 0.038-0.207) using the discovery cohorts and 0.018 (CI -0.002, 0.039) when adding in replication cohorts. Negative genetic correlation with complex traits including type 2 diabetes, depression, neuroticism and asthma was only found using discovery summary data. Furthermore, we did not identify any genes/gene-sets reaching even suggestive level of significance. This genome-wide association study does not, by itself, provide clear evidence on common genetic variants that influence the dog ownership among European-ancestry individuals.
Keyphrases
- genome wide association study
- genome wide
- dna methylation
- small molecule
- copy number
- type diabetes
- high throughput
- systematic review
- chronic obstructive pulmonary disease
- gene expression
- randomized controlled trial
- cardiovascular disease
- physical activity
- insulin resistance
- hepatitis c virus
- machine learning
- metabolic syndrome
- sleep quality
- single cell
- allergic rhinitis