Ectopic Expression of PtrLBD39 Retarded Primary and Secondary Growth in Populus trichocarpa .
Jing YuBoyuan GaoDanning LiShuang LiVincent L ChiangWei LiChenguang ZhouPublished in: International journal of molecular sciences (2024)
Primary and secondary growth of trees are needed for increments in plant height and stem diameter, respectively, affecting the production of woody biomass for applications in timber, pulp/paper, and related biomaterials. These two types of growth are believed to be both regulated by distinct transcription factor (TF)-mediated regulatory pathways. Notably, we identified PtrLBD39, a highly stem phloem-specific TF in Populus trichocarpa and found that the ectopic expression of PtrLBD39 in P. trichocarpa markedly retarded both primary and secondary growth. In these overexpressing plants, the RNA-seq, ChIP-seq, and weighted gene co-expression network analysis (WGCNA) revealed that PtrLBD39 directly or indirectly regulates TFs governing vascular tissue development, wood formation, hormonal signaling pathways, and enzymes responsible for wood components. This regulation led to growth inhibition, decreased fibrocyte secondary cell wall thickness, and reduced wood production. Therefore, our study indicates that, following ectopic expression in P. trichocarpa , PtrLBD39 functions as a repressor influencing both primary and secondary growth.
Keyphrases
- rna seq
- poor prognosis
- cell wall
- transcription factor
- single cell
- network analysis
- signaling pathway
- binding protein
- magnetic resonance
- computed tomography
- type diabetes
- magnetic resonance imaging
- long non coding rna
- high throughput
- cell proliferation
- contrast enhanced
- copy number
- circulating tumor cells
- genome wide identification