Quantitative Real-Time Analysis of Differentially Expressed Genes in Peripheral Blood Samples of Hypertension Patients.
Fawad AliArif Ullah KhanSyed Aun MuhammadSyed Shams Ul HassanPublished in: Genes (2022)
Hypertension (HTN) is considered one of the most important and well-established reasons for cardiovascular abnormalities, strokes, and premature mortality globally. This study was designed to explore possible differentially expressed genes (DEGs) that contribute to the pathophysiology of hypertension. To identify the DEGs of HTN, we investigated 22 publicly available cDNA Affymetrix datasets using an integrated system-level framework. Gene Ontology (GO), pathway enrichment, and transcriptional factors were analyzed to reveal biological information. From 50 DEGs, we ranked 7 hypertension-related genes ( p -value < 0.05): ADM, ANGPTL4, USP8, EDN, NFIL3, MSR1, and CEBPD. The enriched terms revealed significant functional roles of HIF-1-α transcription; endothelin; GPCR-binding ligand; and signaling pathways of EGF, PIk3, and ARF6. SP1 (66.7%), KLF7 (33.3%), and STAT1 (16.7%) are transcriptional factors associated with the regulatory mechanism. The expression profiles of these DEGs as verified by qPCR showed 3-times higher fold changes (2-ΔΔCt) in ADM, ANGPTL4, USP8, and EDN1 genes compared to control, while CEBPD, MSR1 and NFIL3 were downregulated. The aberrant expression of these genes is associated with the pathophysiological development and cardiovascular abnormalities. This study will help to modulate the therapeutic strategies of hypertension.
Keyphrases
- blood pressure
- genome wide
- transcription factor
- genome wide identification
- peripheral blood
- bioinformatics analysis
- ejection fraction
- end stage renal disease
- genome wide analysis
- dna methylation
- computed tomography
- gene expression
- poor prognosis
- magnetic resonance imaging
- newly diagnosed
- healthcare
- signaling pathway
- copy number
- magnetic resonance
- high resolution
- risk factors
- long non coding rna
- patient reported outcomes
- arterial hypertension
- mass spectrometry
- induced apoptosis
- growth factor
- heat stress