Age and life expectancy clocks based on machine learning analysis of mouse frailty.
Michael B SchultzAlice E KaneSarah J MitchellMichael R MacArthurElisa WarnerDavid S VogelJames R MitchellSusan E HowlettMichael S BonkowskiDavid A SinclairPublished in: Nature communications (2020)
The identification of genes and interventions that slow or reverse aging is hampered by the lack of non-invasive metrics that can predict the life expectancy of pre-clinical models. Frailty Indices (FIs) in mice are composite measures of health that are cost-effective and non-invasive, but whether they can accurately predict health and lifespan is not known. Here, mouse FIs are scored longitudinally until death and machine learning is employed to develop two clocks. A random forest regression is trained on FI components for chronological age to generate the FRIGHT (Frailty Inferred Geriatric Health Timeline) clock, a strong predictor of chronological age. A second model is trained on remaining lifespan to generate the AFRAID (Analysis of Frailty and Death) clock, which accurately predicts life expectancy and the efficacy of a lifespan-extending intervention up to a year in advance. Adoption of these clocks should accelerate the identification of longevity genes and aging interventions.
Keyphrases
- machine learning
- healthcare
- public health
- bioinformatics analysis
- mental health
- community dwelling
- health information
- physical activity
- genome wide
- artificial intelligence
- health promotion
- resistance training
- big data
- gene expression
- body composition
- dna methylation
- social media
- electronic health record
- hip fracture
- drosophila melanogaster