TERT silencing alters the expression of ARG1, GLUL, VIM , NES genes and hsa-miR-29b-3p in the T98G cell line.
Yeimy González-GiraldoÁngela Y García FonsecaAndres Felipe Aristizábal PachónPublished in: Nucleosides, nucleotides & nucleic acids (2022)
The central function of telomerase is maintaining the telomere length. However, several extra-telomeric roles have been identified for this protein complex. In this study, we evaluated the effect of the silencing of the catalytic subunit of telomerase (TERT) on the expression of candidate microRNAs, cell activation markers and glial-related genes in a glioblastoma cell line (T98G). The silencing was performed by a siRNA and the qPCR method was used to analyze the expression of TERT and downstream genes. Flow cytometry was used to quantify the TERT protein, and bioinformatics analysis was carried out to analyze the functions of microRNA target genes. Here, it was observed that after a 50% reduction of the TERT gene, the expression of ARG1 (Arginase 1) was upregulated, whereas NES (Nestin), GLUL (Glutamate-Ammonia Ligase), VIM (Vimentin) and the hsa-miR-29b-3p microRNA were downregulated ( P -value <0.05). A bioinformatic analysis showed that target genes of hsa-miR-29b are associated with focal adhesion, the PI3K-Akt signaling pathway, among others. These results are important because they contribute to the knowledge of extratelomeric functions by providing relevant evidence about novel genes modulated by TERT.
Keyphrases
- bioinformatics analysis
- poor prognosis
- genome wide
- genome wide identification
- binding protein
- signaling pathway
- flow cytometry
- healthcare
- genome wide analysis
- dna methylation
- spinal cord injury
- escherichia coli
- transcription factor
- cystic fibrosis
- oxidative stress
- pi k akt
- small molecule
- copy number
- dna damage
- bone marrow
- spinal cord
- pseudomonas aeruginosa
- mesenchymal stem cells
- candida albicans
- room temperature