LongStitch: high-quality genome assembly correction and scaffolding using long reads.
Lauren CoombeJanet X LiTheodora LoJohnathan WongVladimir NikolicRené L WarrenInanc BirolPublished in: BMC bioinformatics (2021)
Due to its effectiveness and efficiency in improving draft assemblies using long reads, we expect LongStitch to benefit a wide variety of de novo genome assembly projects. The LongStitch pipeline is freely available at https://github.com/bcgsc/longstitch .