Plants Metabolome Study: Emerging Tools and Techniques.
Manish Kumar PatelSonika PandeyManoj KumarMd Intesaful HaqueSikander PalNarendra Singh YadavPublished in: Plants (Basel, Switzerland) (2021)
Metabolomics is now considered a wide-ranging, sensitive and practical approach to acquire useful information on the composition of a metabolite pool present in any organism, including plants. Investigating metabolomic regulation in plants is essential to understand their adaptation, acclimation and defense responses to environmental stresses through the production of numerous metabolites. Moreover, metabolomics can be easily applied for the phenotyping of plants; and thus, it has great potential to be used in genome editing programs to develop superior next-generation crops. This review describes the recent analytical tools and techniques available to study plants metabolome, along with their significance of sample preparation using targeted and non-targeted methods. Advanced analytical tools, like gas chromatography-mass spectrometry (GC-MS), liquid chromatography mass-spectroscopy (LC-MS), capillary electrophoresis-mass spectrometry (CE-MS), fourier transform ion cyclotron resonance-mass spectrometry (FTICR-MS) matrix-assisted laser desorption/ionization (MALDI), ion mobility spectrometry (IMS) and nuclear magnetic resonance (NMR) have speed up precise metabolic profiling in plants. Further, we provide a complete overview of bioinformatics tools and plant metabolome database that can be utilized to advance our knowledge to plant biology.
Keyphrases
- mass spectrometry
- liquid chromatography
- capillary electrophoresis
- gas chromatography
- high resolution
- high resolution mass spectrometry
- magnetic resonance
- tandem mass spectrometry
- gas chromatography mass spectrometry
- solid phase extraction
- high performance liquid chromatography
- crispr cas
- genome editing
- simultaneous determination
- healthcare
- high throughput
- magnetic resonance imaging
- social media
- contrast enhanced
- cell wall
- energy transfer
- solid state