Transcriptome-Wide Identification of Dark- and Salt-Induced Senescence-Related NAC Gene Family Members in Alfalfa.
Xiangxue DuanDaicai TianPeiran GaoYue SunXiaojing PengJiangqi WenHongli XieZeng-Yu WangMaofeng ChaiPublished in: International journal of molecular sciences (2024)
Leaves are a key forage part for livestock, and the aging of leaves affects forage biomass and quality. Preventing or delaying premature leaf senescence leads to an increase in pasture biomass accumulation and an improvement in alfalfa quality. NAC transcription factors have been reported to affect plant growth and abiotic stress responses. In this study, 48 NAC genes potentially associated with leaf senescence were identified in alfalfa under dark or salt stress conditions. A phylogenetic analysis divided MsNACs into six subgroups based on similar gene structure and conserved motif. These MsNACs were unevenly distributed in 26 alfalfa chromosomes. The results of the collinearity analysis show that all of the MsNACs were involved in gene duplication. Some cis -acting elements related to hormones and stress were screened in the 2-kb promoter regions of MsNACs . Nine of the MsNAC genes were subjected to qRT-PCR to quantify their expression and Agrobacterium -mediated transient expression to verify their functions. The results indicate that Ms.gene031485, Ms.gene032313, Ms.gene08494, and Ms.gene77666 might be key NAC genes involved in alfalfa leaf senescence. Our findings extend the understanding of the regulatory function of MsNACs in leaf senescence.
Keyphrases
- genome wide identification
- transcription factor
- genome wide
- genome wide analysis
- copy number
- dna damage
- multiple sclerosis
- endothelial cells
- mass spectrometry
- stress induced
- dna methylation
- poor prognosis
- gene expression
- ms ms
- wastewater treatment
- high glucose
- dna binding
- bioinformatics analysis
- long non coding rna
- brain injury
- blood brain barrier
- plant growth