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Comparative Analysis and Expression Patterns of the PLP_deC Genes in Dendrobium officinale.

Lei ZhangChunyan JiaoMuhammad AbdullahXi ChengJian WangQing JinYongping Cai
Published in: International journal of molecular sciences (2019)
Studies have shown that the type II pyridoxal phosphate-dependent decarboxylase (PLP_deC) genes produce secondary metabolites and flavor volatiles in plants, and TDC (tryptophan decarboxylase), a member of the PLP_deC family, plays an important role in the biosynthesis of terpenoid indole alkaloids (TIAs). In this study, we identified eight PLP_deC genes in Dendrobium officinale (D. officinale) and six in Phalaenopsis equestris (P. equestris), and their structures, physicochemical properties, response elements, evolutionary relationships, and expression patterns were preliminarily predicted and analyzed. The results showed that PLP_deC genes play important roles in D. officinale and respond to different exogenous hormone treatments; additionally, the results support the selection of appropriate candidates for further functional characterization of PLP_deC genes in D. officinale.
Keyphrases
  • genome wide
  • bioinformatics analysis
  • genome wide identification
  • poor prognosis
  • dna methylation
  • genome wide analysis
  • ms ms
  • high resolution
  • binding protein
  • long non coding rna
  • solid phase extraction