The ATCC Genome Portal: Microbial Genome Reference Standards with Data Provenance.

Briana BentonStephen KingSamuel R GreenfieldNikhita PuthuveetilAmy L ReeseJames DuncanRobert MarlowCorina TabronAmanda E PierolaDavid A YarmoshPatrick Ford CombsMarco A RiojasJohn BagnoliJonathan L Jacobs

Published in: Microbiology resource announcements (2021)

Lack of data provenance negatively impacts scientific reproducibility and the reliability of genomic data. The ATCC Genome Portal (https://genomes.atcc.org) addresses this by providing data provenance information for microbial whole-genome assemblies originating from authenticated biological materials. To date, we have sequenced 1,579 complete genomes, including 466 type strains and 1,156 novel genomes.

Keyphrases

electronic health record
big data
microbial community
escherichia coli
genome wide
gene expression
healthcare
dna methylation
copy number