Jonathan L Jacobs (Jonathan Jacobs)

Scopus Author ID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 20

Top Venues

Microbiology resource announcements

Briefings in bioinformatics

Tropical medicine and infectious disease

Antimicrobial agents and chemotherapy

QIAGEN Sciences Inc

University of Maryland (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

QIAGEN Sciences Inc May 01 2018

United States

Director of Global Product Management, Genomic Analysis :: Bioinformatics

MRIGlobal Oct 01 2016 - Apr 30 2018

United States

Senior Advisor :: Global Health Surveillance & Diagnostics

MRIGlobal Oct 01 2013 - Oct 01 2016

United States

Principal Scientist :: Global Health Surveillance & Diagnostics

MRIGlobal Oct 01 2010 - Oct 01 2013

United States

Senior Scientist :: Global Health Surveillance & Diagnostics

MedImmune LLC Feb 05 2009 - Oct 01 2010

United States

Scientist I :: Antibody Discovery & Protein Engineering

National Institutes of Health Jun 01 2006 - Dec 15 2008

United States

Postdoctoral Research Fellow

Education History

University of Maryland Sep 01 1999 - May 15 2006

United States

PHD :: Cell Biology & Molecular Genetics

University of Arizona College of Agriculture and Life Sciences Sep 01 1996 - May 15 1999

United States

BSC :: Plant Biology

Publications

Johanna L Rhodes, Jonathan L Jacobs, Emily K Dennis, Swati R Manjari, Nilesh K Banavali, Robert Marlow, Mohammed Anower Rokebul, Sudha Chaturvedi, Vishnu Chaturvedi
What makes Candida auris pan-drug resistant? Integrative insights from genomic, transcriptomic, and phenomic analysis of clinical strains resistant to all four major classes of antifungal drugs. bioRxiv : the preprint server for biology (2024)
Scott V Nguyen, Nikhita P Puthuveetil, Joseph R Petrone, Jade L Kirkland, Kaitlyn Gaffney, Corina L Tabron, Noah Wax, James Duncan, Stephen King, Robert Marlow, Amy L Reese, David A Yarmosh, Hannah H McConnell, Ana S Fernandes, John Bagnoli, Briana Benton, Jonathan L Jacobs
The ATCC genome portal: 3,938 authenticated microbial reference genomes. Microbiology resource announcements 13 (2) (2024)
Adam Wright, Mark D Wilkinson, Christopher John Mungall, Scott Cain, Stephen Richards, Paul W Sternberg, Ellen Provin, Jonathan L Jacobs, Scott M Geib, Daniela Raciti, Karen Yook, Lincoln D Stein, David C Molik
FAIR Header Reference genome: a TRUSTworthy standard. Briefings in bioinformatics 25 (3) (2024)
Scott V Nguyen, Nikhita P Puthuveetil, Joseph R Petrone, Jade L Kirkland, Kaitlyn Gaffney, Corina L Tabron, Noah Wax, James Duncan, Stephen King, Robert Marlow, Amy L Reese, David A Yarmosh, Hannah H McConnell, Ana S Fernandes, John Bagnoli, Briana Benton, Jonathan L Jacobs
The ATCC genome portal: 3,938 authenticated microbial reference genomes. Microbiology resource announcements 13 (2) (2024)
Scott V Nguyen, Nikhita P Puthuveetil, Joseph R Petrone, Jade L Kirkland, Kaitlyn Gaffney, Corina L Tabron, Noah Wax, James Duncan, Stephen King, Robert Marlow, Amy L Reese, David A Yarmosh, Hannah H McConnell, Ana S Fernandes, John Bagnoli, Briana Benton, Jonathan L Jacobs
The ATCC genome portal: 3,938 authenticated microbial reference genomes. Microbiology resource announcements 13 (2) (2024)
Scott V Nguyen, Nikhita P Puthuveetil, Joseph R Petrone, Jade L Kirkland, Kaitlyn Gaffney, Corina L Tabron, Noah Wax, James Duncan, Stephen King, Robert Marlow, Amy L Reese, David A Yarmosh, Hannah H McConnell, Ana S Fernandes, John Bagnoli, Briana Benton, Jonathan L Jacobs
The ATCC genome portal: 3,938 authenticated microbial reference genomes. Microbiology resource announcements (2024)
Johanna Rhodes, Jonathan L Jacobs, Emily K Dennis, Swati R Manjari, Nilesh K Banavali, Robert Marlow, Mohammed Anower Rokebul, Sudha Chaturvedi, Vishnu Chaturvedi
What makes Candida auris pan-drug resistant? Integrative insights from genomic, transcriptomic, and phenomic analysis of clinical strains resistant to all four major classes of antifungal drugs. Antimicrobial agents and chemotherapy (2024)
Adam Wright, Mark D Wilkinson, Christopher John Mungall, Scott Cain, Stephen Richards, Paul W Sternberg, Ellen Provin, Jonathan L Jacobs, Scott M Geib, Daniela Raciti, Karen Yook, Lincoln D Stein, David C Molik
FAIR Header Reference genome: a TRUSTworthy standard. Briefings in bioinformatics 25 (3) (2024)
Adam Wright, Mark D Wilkinson, Christopher John Mungall, Scott Cain, Stephen Richards, Paul W Sternberg, Ellen Provin, Jonathan L Jacobs, Scott M Geib, Daniela Raciti, Karen Yook, Lincoln D Stein, David C Molik
FAIR Header Reference genome: a TRUSTworthy standard. Briefings in bioinformatics 25 (3) (2024)
Adam Wright, Mark D Wilkinson, Christopher John Mungall, Scott Cain, Stephen Richards, Paul W Sternberg, Ellen Provin, Jonathan L Jacobs, Scott M Geib, Daniela Raciti, Karen Yook, Lincoln D Stein, David C Molik
FAIR Header Reference genome: a TRUSTworthy standard. Briefings in bioinformatics 25 (3) (2024)
Adam Wright, Mark D Wilkinson, Christopher John Mungall, Scott Cain, Stephen Richards, Paul W Sternberg, Ellen Provin, Jonathan L Jacobs, Scott M Geib, Daniela Raciti, Karen Yook, Lincoln D Stein, David C Molik
DATA RESOURCES AND ANALYSES FAIR Header Reference genome: A TRUSTworthy standard. bioRxiv : the preprint server for biology (2023)
Kyle Parker, Hillary Wood, Joseph A Russell, David A Yarmosh, Alan Shteyman, John Bagnoli, Brittany Knight, Jacob R Aspinwall, Jonathan L Jacobs, Kristine Werking, Richard Winegar
Development and Optimization of an Unbiased, Metagenomics-Based Pathogen Detection Workflow for Infectious Disease and Biosurveillance Applications. Tropical medicine and infectious disease 8 (2) (2023)
Kyle Parker, Hillary Wood, Joseph A Russell, David A Yarmosh, Alan Shteyman, John Bagnoli, Brittany Knight, Jacob R Aspinwall, Jonathan L Jacobs, Kristine Werking, Richard Winegar
Development and Optimization of an Unbiased, Metagenomics-Based Pathogen Detection Workflow for Infectious Disease and Biosurveillance Applications. Tropical medicine and infectious disease 8 (2) (2023)
Kyle Parker, Hillary Wood, Joseph A Russell, David A Yarmosh, Alan Shteyman, John Bagnoli, Brittany Knight, Jacob R Aspinwall, Jonathan L Jacobs, Kristine Werking, Richard Winegar
Development and Optimization of an Unbiased, Metagenomics-Based Pathogen Detection Workflow for Infectious Disease and Biosurveillance Applications. Tropical medicine and infectious disease 8 (2) (2023)
Samantha E Jacobs, Jonathan L Jacobs, Emily K Dennis, Sarah Taimur, Meenakshi Rana, Dhruv Patel, Melissa Randy Gitman, Gopi Patel, Sarah Schaefer, Kishore Iyer, Jang Moon, Victoria Adams, Polina Lerner, Thomas J Walsh, YanChun Zhu, Mohammed Rokebul Anower, Mayuri M Vaidya, Sudha Chaturvedi, Vishnu Chaturvedi
Candida auris Pan-Drug-Resistant to Four Classes of Antifungal Agents. Antimicrobial agents and chemotherapy 66 (7) (2022)
David A Yarmosh, Juan G Lopera, Nikhita P Puthuveetil, Patrick Ford Combs, Amy L Reese, Corina Tabron, Amanda E Pierola, James Duncan, Samuel R Greenfield, Robert Marlow, Stephen King, Marco A Riojas, John Bagnoli, Briana Benton, Jonathan L Jacobs
Comparative Analysis and Data Provenance for 1,113 Bacterial Genome Assemblies. mSphere 7 (3) (2022)
Caitlin W Lehman, Amy Smith, Jamie A Kelly, Jonathan L Jacobs, Jonathan D Dinman, Kylene Kehn-Hall
EGR1 Upregulation during Encephalitic Viral Infections Contributes to Inflammation and Cell Death. Viruses 14 (6) (2022)
Bibha Dahal, Caitlin W Lehman, Ivan Akhrymuk, Nicole R Bracci, Lauren Panny, Michael D Barrera, Nishank Bhalla, Jonathan L Jacobs, Jonathan D Dinman, Kylene Kehn-Hall
PERK Is Critical for Alphavirus Nonstructural Protein Translation. Viruses 13 (5) (2021)
Briana Benton, Stephen King, Samuel R Greenfield, Nikhita Puthuveetil, Amy L Reese, James Duncan, Robert Marlow, Corina Tabron, Amanda E Pierola, David A Yarmosh, Patrick Ford Combs, Marco A Riojas, John Bagnoli, Jonathan L Jacobs
The ATCC Genome Portal: Microbial Genome Reference Standards with Data Provenance. Microbiology resource announcements 10 (47) (2021)
Joseph A Russell, Brittany Campos, Jennifer Stone, Erik M Blosser, Nathan D Burkett-Cadena, Jonathan L Jacobs
Unbiased Strain-Typing of Arbovirus Directly from Mosquitoes Using Nanopore Sequencing: A Field-forward Biosurveillance Protocol. Scientific reports 8 (1) (2018)

Jonathan L Jacobs.css-eqlu8i{font-size:small;padding-left:4px;} (Jonathan Jacobs)

Publication Activity (10 Years)

Top Topics

Top Venues

Jonathan L Jacobs (Jonathan Jacobs)