Comparative Expression Analysis of Breakpoint Cluster Region-Abelson Oncogene in Leukemia Patients.
Farah ArshadAmjad AliGauhar RehmanSobia Ahsan HalimMuhammad WaqasAsaad KhalidAshraf N AbdallaAjmal KhanAhmed Al HarrasiPublished in: ACS omega (2023)
Leukemia is a proliferative disorder of myeloid and lymphoid cells that may lead to death. Different types of leukemia have been reported, and several genetic and environmental factors are involved in their development. The Philadelphia chromosome causes the most common mutation known as breakpoint cluster region-Abelson oncogene (BCR-ABL1), which shows abnormal protein tyrosine kinase (PTK) activity. Basically, this activity is accountable for activating multiple pathways, including the inhibition of cell differentiation, controlled proliferation, and cell death. As a result of the absence of kinase activity, this mutation leads to the uncontrolled proliferation of leukocytes, causing chronic myeloid leukemia (CML), acute myeloid leukemia (AML), acute lymphoid leukemia (ALL), and chronic lymphocytic leukemia (CLL). This study aimed to evaluate the level of BCR-ABL1 expression in patients with these types of leukemias through qPCR. In brief, PBMCs were isolated from blood samples of patients, RNA was extracted from PBMCs, cDNA was synthesized, and the transcript levels of BCR-ABL1 in patients with each type of leukemia were determined by qPCR. The clinical, demographical, and experimental data were analyzed among CML, AML, and ALL patients. Results: The BCR-ABL1 expression levels are variable in all studied groups and are 90, 30-35, and 1-2.5% in CML, ALL, and AML, respectively. Demographic characteristics such as gender, BMI, age, family history, and clinical parameters along with CBC are also associated with the prevalence and diagnosis of leukemia. In a comparative expression analysis, the expression of BCR-ABL1 is onefold high in AML, but four- and sevenfold high in ALL and CML, respectively, as compared with normal levels. Conclusions: In this study, a significant difference was observed in the expression levels of BCR-ABL1 between CML ( p = 0.0043) and ALL ( p = 0.0006) and between CML and AML groups, and a high expression of BCR-ABL1 was noted in CML as compared with ALL and AML.
Keyphrases
- chronic myeloid leukemia
- acute myeloid leukemia
- tyrosine kinase
- poor prognosis
- allogeneic hematopoietic stem cell transplantation
- end stage renal disease
- ejection fraction
- bone marrow
- newly diagnosed
- cell death
- epidermal growth factor receptor
- chronic kidney disease
- signaling pathway
- prognostic factors
- patient reported outcomes
- binding protein
- chronic lymphocytic leukemia
- oxidative stress
- dendritic cells
- mental health
- risk factors
- physical activity
- gene expression
- hepatitis b virus
- cell cycle arrest
- single cell
- deep learning
- peripheral blood
- genome wide
- patient reported
- cell proliferation
- immune response
- dna methylation
- small molecule
- transcription factor
- copy number
- mechanical ventilation