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Comparative transcriptomics between high and low rubber producing Taraxacum kok-saghyz R. plants.

Francesco PanaraLoredana LopezLoretta DaddiegoElio FantiniPaolo FacellaGaetano Perrotta
Published in: BMC genomics (2018)
Our results show that a higher amount of rubber in the latex in HR plants is positively correlated with high expression levels of a number of genes directly involved in rubber synthesis showing that NR production is highly controlled at transcriptional level. On the other hand, lower amounts of rubber in LR plants is related with higher expression of genes involved in the synthesis of other secondary metabolites that, we hypothesize, may compete towards NR biosynthesis. This dataset represents a fundamental genomic resource for the study of Tks and the comprehension of the synthesis of NR and other biochemically and pharmacologically relevant compounds in the Taraxacum genus.
Keyphrases
  • poor prognosis
  • gene expression
  • single cell
  • ms ms
  • genome wide
  • long non coding rna
  • copy number
  • oxidative stress
  • heat shock protein