SpheroScan: a user-friendly deep learning tool for spheroid image analysis.

Akshay Akshay Mitali Katoch Masoud Abedi Navid Shekarchizadeh Mustafa Besic Fiona C Burkhard Alex Bigger-Allen Rosalyn M Adam Katia Monastyrskaya Ali Hashemi Gheinani

Published in: GigaScience (2023)

SpheroScan allows for easy analysis of large numbers of images and provides interactive visualization features for a more in-depth understanding of the data. Our tool represents a significant advancement in the analysis of spheroid images and will facilitate the widespread adoption of 3D spheroid models in scientific research. The source code and a detailed tutorial for SpheroScan are available at https://github.com/FunctionalUrology/SpheroScan.

Keyphrases

deep learning
convolutional neural network
optical coherence tomography
electronic health record
artificial intelligence
machine learning
big data
low cost