Lost genome segments associate with trait diversity during rice domestication.
Xiaoming ZhengLimei ZhongHongbo PangSiyu WenFei LiDanjing LouJinyue GeWeiya FanTianyi WangZhenyun HanWeihua QiaoXiaowu PanYebao ZhuJilin WangCuifeng TangXinhua WangJing ZhangZhijian XuSung Ryul KimAjay KohliGuoyou YeKenneth M OlsenWei FangQingwen YangPublished in: BMC biology (2023)
We provide relatively accurate and complete SV datasets for cultivated and wild rice accessions, especially in TE-rich regions, by comparing long-read sequencing data for 13 representative varieties. The integrated rice SV map and the identified candidate genes and variants represent valuable resources for future genomic research and breeding in rice.