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The Neurospora Transcription Factor ADV-1 Transduces Light Signals and Temporal Information to Control Rhythmic Expression of Genes Involved in Cell Fusion.

Rigzin DekhangCheng WuKristina M SmithTeresa M LambMatthew PetersonErin L BredewegOneida IbarraJillian M EmersonNirmala KarunarathnaAnna LyubetskayaElham AziziJennifer M HurleyJay C DunlapJames E GalaganMichael FreitagMatthew S SachsDeborah Bell-Pedersen
Published in: G3 (Bethesda, Md.) (2017)
Light and the circadian clock have a profound effect on the biology of organisms through the regulation of large sets of genes. Toward understanding how light and the circadian clock regulate gene expression, we used genome-wide approaches to identify the direct and indirect targets of the light-responsive and clock-controlled transcription factor ADV-1 in Neurospora crassa A large proportion of ADV-1 targets were found to be light- and/or clock-controlled, and enriched for genes involved in development, metabolism, cell growth, and cell fusion. We show that ADV-1 is necessary for transducing light and/or temporal information to its immediate downstream targets, including controlling rhythms in genes critical to somatic cell fusion. However, while ADV-1 targets are altered in predictable ways in Δadv-1 cells in response to light, this is not always the case for rhythmic target gene expression. These data suggest that a complex regulatory network downstream of ADV-1 functions to generate distinct temporal dynamics of target gene expression relative to the central clock mechanism.
Keyphrases
  • gene expression
  • transcription factor
  • genome wide
  • dna methylation
  • single cell
  • cell therapy
  • poor prognosis
  • induced apoptosis
  • copy number
  • dna binding
  • big data
  • health information
  • bone marrow
  • cell death