B Cell Lymphocytes as a Potential Source of Breast Carcinoma Marker Candidates.
Soňa TkáčikováMiroslav MarcinPeter BoberMária KacírováMichaela ŠulikováJozef ParnicaDávid TóthMarek LenártJozef RadoňakPeter UrdzíkJan FedackoJán SaboPublished in: International journal of molecular sciences (2024)
Despite advances in the genomic classification of breast cancer, current clinical tests and treatment decisions are commonly based on protein-level information. Nowadays breast cancer clinical treatment selection is based on the immunohistochemical (IHC) determination of four protein biomarkers: Estrogen Receptor 1 (ESR1), Progesterone Receptor (PGR), Human Epidermal Growth Factor Receptor 2 (HER2), and proliferation marker Ki-67. The prognostic correlation of tumor-infiltrating T cells has been widely studied in breast cancer, but tumor-infiltrating B cells have not received so much attention. We aimed to find a correlation between immunohistochemical results and a proteomic approach in measuring the expression of proteins isolated from B-cell lymphocytes in peripheral blood samples. Shotgun proteomic analysis was chosen for its key advantage over other proteomic methods, which is its comprehensive and untargeted approach to analyzing proteins. This approach facilitates better characterization of disease-associated changes at the protein level. We identified 18 proteins in B cell lymphocytes with a significant fold change of more than 2, which have promising potential to serve as breast cancer biomarkers in the future.
Keyphrases
- peripheral blood
- estrogen receptor
- epidermal growth factor receptor
- binding protein
- protein protein
- endothelial cells
- poor prognosis
- machine learning
- signaling pathway
- healthcare
- dna methylation
- mass spectrometry
- working memory
- radiation therapy
- young adults
- current status
- copy number
- replacement therapy
- childhood cancer
- genome wide