In-silico heart model phantom to validate cardiac strain imaging.
Tanmay MukherjeeMuhammad UsmanRana Raza MehdiEmilio MendiolaJacques OhayonDiana LindquistDipan ShahSakthivel SadayappanRoderic PettigrewReza AvazmohammadiPublished in: bioRxiv : the preprint server for biology (2024)
The quantification of cardiac strains as structural indices of cardiac function has a growing prevalence in clinical diagnosis. However, the highly heterogeneous four-dimensional (4D) cardiac motion challenges accurate "regional" strain quantification and leads to sizable differences in the estimated strains depending on the imaging modality and post-processing algorithm, limiting the translational potential of strains as incremental biomarkers of cardiac dysfunction. There remains a crucial need for a feasible benchmark that successfully replicates complex 4D cardiac kinematics to determine the reliability of strain calculation algorithms. In this study, we propose an in-silico heart phantom derived from finite element (FE) simulations to validate the quantification of 4D regional strains. First, as a proof-of-concept exercise, we created synthetic magnetic resonance (MR) images for a hollow thick-walled cylinder under pure torsion with an exact solution and demonstrated that "ground-truth" values can be recovered for the twist angle, which is also a key kinematic index in the heart. Next, we used mouse-specific FE simulations of cardiac kinematics to synthesize dynamic MR images by sampling various sectional planes of the left ventricle (LV). Strains were calculated using our recently developed non-rigid image registration (NRIR) framework in both problems. Moreover, we studied the effects of image quality on distorting regional strain calculations by conducting in-silico experiments for various LV configurations. Our studies offer a rigorous and feasible tool to standardize regional strain calculations to improve their clinical impact as incremental biomarkers.
Keyphrases
- magnetic resonance
- escherichia coli
- left ventricular
- deep learning
- image quality
- high resolution
- molecular dynamics
- monte carlo
- heart failure
- density functional theory
- computed tomography
- magnetic resonance imaging
- epithelial mesenchymal transition
- physical activity
- signaling pathway
- convolutional neural network
- molecular dynamics simulations
- pulmonary hypertension
- pulmonary artery
- finite element
- photodynamic therapy
- body composition
- resistance training
- metal organic framework
- dual energy
- climate change
- tandem mass spectrometry
- neural network
- solid state
- upper limb