Genome-based taxonomy and functional prediction of Sphingomonas fuzhouensis sp. nov. and Massilia phyllosphaerae sp. nov. isolated from Pennisetum sp. with plant growth-promoting potential.
Ling YaoGuo-Hong LiuShu-Yi ZhangPeng GaoChristopher RensingQiu-E YangShun-Gui ZhouPublished in: Antonie van Leeuwenhoek (2024)
Two facultatively aerobic strains, designated SGZ-02 T and SGZ-792 T , were isolated from plant Pennisetum sp., exhibiting the highest 16S rRNA gene sequence similarities with the type strains of Sphingomonas zeae LMG 28739 T (98.6%) and Massilia forsythiae NBRC 114511 T (98.4%), respectively. SGZ-02 T grew between 5 and 45 °C, pH 5.0-11.0 and tolerated NaCl concentrations of 0-4% (w/v), whereas SGZ-792 T thrived at 5-40 °C, pH 5.0-11.0 and NaCl tolerance to 0-3.5% (w/v). The major quinone of SGZ-02 T was ubiquinone-10, with the dominant fatty acids being C 16:0 (13.5%), Summed Feature 3 (6.3%), C 14:0 2-OH (5.3%) and Summed Feature 8 (66.3%). SGZ-792 T predominantly contained ubiquinone-8, with major fatty acids being C 16:0 (20.3%), Summed Feature 3 (5.0%) and Summed Feature 8 (54.7%). Average nucleotide identity and digital DNA-DNA hybridization values between two strains and their closest references strains were below the bacterial species threshold. Based on genotypic and phenotypic characteristics, strains SGZ-02 T and SGZ-792 T are proposed as novel species within the genera Sphingomonas and Massilia, respectively. The suggested names for the new species are Sphingomonas fuzhouensis sp. nov. (SGZ-02 T = GDMCC 1.4033 T = JCM 36769 T ) and Massilia phyllosphaerae sp. nov. (SGZ-792 T = GDMCC 1.4211 T = JCM 36643 T ), respectively.