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Cluster analysis of transcriptomic datasets to identify endotypes of idiopathic pulmonary fibrosis.

Luke M KravenAdam R TaylorPhilip L MolyneauxToby M MaherJohn E McDonoughMarco MuraIvana V YangDavid A SchwartzYong HuangImre NothShwu Fan MaAstrid J YeoWilliam A FahyR Gisli JenkinsLouise V Wain
Published in: Thorax (2022)
We have identified blood gene expression signatures capable of discerning groups of patients with IPF with significant differences in survival. These clusters could be representative of distinct pathophysiological states, which would support the theory of multiple endotypes of IPF. Although more work must be done to confirm the existence of these endotypes, our classifier could be a useful tool in patient stratification and outcome prediction in IPF.
Keyphrases
  • idiopathic pulmonary fibrosis
  • gene expression
  • interstitial lung disease
  • rna seq
  • dna methylation
  • case report
  • single cell
  • genome wide
  • cross sectional