Identification of the Porcine Vascular Endothelial Cell-Specific Promoter ESAM1.0 Using Transcriptome Analysis.
Sang Eun KimWu-Sheng SunMiae OhSeunghoon LeeJin-Gu NoHaesun LeePoongyeon LeeKeon Bong OhPublished in: Genes (2023)
The vascular endothelium of xenografted pig organs represents the initial site of rejection after exposure to recipient immune cells. In this study, we aimed to develop a promoter specific to porcine vascular endothelial cells as a step toward overcoming xenograft rejection. Transcriptome analysis was performed on porcine aortic endothelial cells (PAECs), ear skin fibroblasts isolated from GGTA knockout (GTKO) pigs, and the porcine renal epithelial cell line pk-15. RNA sequencing confirmed 243 differentially expressed genes with expression changes of more than 10-fold among the three cell types. Employing the Human Protein Atlas database as a reference, we identified 34 genes exclusive to GTKO PAECs. The endothelial cell-specific adhesion molecule ( ESAM ) was selected via qPCR validation and showed high endothelial cell specificity and stable expression across tissues. We selected 1.0 kb upstream sequences of the translation start site of the gene as the promoter ESAM1.0. A luciferase assay revealed that ESAM1.0 promoter transcriptional activity was significant in PAECs, leading to a 2.8-fold higher level of expression than that of the porcine intercellular adhesion molecule 2 ( ICAM2 ) promoter, which is frequently used to target endothelial cells in transgenic pigs. Consequently, ESAM1.0 will enable the generation of genetically modified pigs with endothelium-specific target genes to reduce xenograft rejection.
Keyphrases
- endothelial cells
- dna methylation
- transcription factor
- gene expression
- genome wide
- high glucose
- poor prognosis
- single cell
- genome wide identification
- vascular endothelial growth factor
- bioinformatics analysis
- binding protein
- long non coding rna
- cystic fibrosis
- high throughput
- pseudomonas aeruginosa
- genome wide analysis
- pulmonary hypertension
- biofilm formation
- bone marrow
- escherichia coli
- coronary artery
- emergency department
- pulmonary artery
- soft tissue
- drug induced