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New insights into the evolution and functional divergence of the CIPK gene family in Saccharum.

Weihua SuYongjuan RenDongjiao WangLong HuangXueqin FuHui LingYachun SuNing HuangHanchen TangLiping XuYou-Xiong Que
Published in: BMC genomics (2020)
In generally, a comprehensive genome-wide analysis of evolutionary relationship, gene structure, motif composition, and gene duplications of SsCIPK family genes were performed in S. spontaneum. The functional study of expression patterns in sugarcane and allogenic expressions in E. coli and N. benthamiana showed that ScCIPKs played various roles in response to different stresses. Thus, these results improve our understanding of the evolution of the CIPK gene family in sugarcane as well as provide a basis for in-depth functional studies of CIPK genes in sugarcane.
Keyphrases
  • genome wide
  • dna methylation
  • copy number
  • genome wide identification
  • poor prognosis
  • escherichia coli
  • genome wide analysis
  • optical coherence tomography
  • case control