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Measurement Biases Distort Cell-Free DNA Fragmentation Profiles and Define the Sensitivity of Metagenomic Cell-Free DNA Sequencing Assays.

Adrienne ChangOmary MzavaJoan S LenzAlexandre P ChengPhilip BurnhamS Timothy MotleyCrissa BennettJohn T ConnellyDarshana M DadhaniaManikkam SuthanthiranJohn R LeeAmy SteadmanIwijn De Vlaminck
Published in: Clinical chemistry (2021)
Substantial gains in the sensitivity of microbial and other short fragment recovery can be achieved by easy-to-implement changes in the sample preparation protocol, which highlights the need for standardization in the liquid biopsy field.
Keyphrases
  • randomized controlled trial
  • microbial community
  • single cell
  • high throughput
  • antibiotic resistance genes
  • ionic liquid
  • wastewater treatment
  • mass spectrometry
  • tandem mass spectrometry
  • anaerobic digestion