DsDBF1 , a Type A-5 DREB Gene, Identified and Characterized in the Moss Dicranum scoparium .
Alfred O OneleAnastasia B MazinaIlya Y LeksinFarida V MinibayevaPublished in: Life (Basel, Switzerland) (2022)
Plant dehydration-responsive element binding (DREB) transcription factors (TFs) play important roles during stress tolerance by regulating the expression of numerous genes involved in stresses. DREB TFs have been extensively studied in a variety of angiosperms and bryophytes. To date, no information on the identification and characterization of DREB TFs in Dicranum scoparium has been reported. In this study, a new DBF1 gene from D. scoparium was identified by cloning and sequencing. Analysis of the conserved domain and physicochemical properties revealed that DsDBF1 protein has a classic AP2 domain encoding a 238 amino acid polypeptide with a molecular mass of 26 kDa and a pI of 5.98. Subcellular prediction suggested that DsDBF1 is a nuclear and cytoplasmic protein. Phylogenetic analysis showed that DsDBF1 belongs to group A-5 DREBs. Expression analysis by reverse transcription quantitative real-time polymerase chain reaction (RT-qPCR) revealed that DsDBF1 was significantly upregulated in response to abiotic stresses such as desiccation/rehydration, exposure to paraquat, CdCl 2 , high and freezing temperatures. Taken together, our data suggest that DsDBF1 could be a promising gene candidate to improve stress tolerance in crop plants, and the characterization of TFs of a stress tolerant moss such as D. scoparium provides a better understanding of plant adaptation mechanisms.
Keyphrases
- genome wide identification
- transcription factor
- amino acid
- genome wide
- copy number
- single cell
- binding protein
- dna binding
- poor prognosis
- protein protein
- stress induced
- multidrug resistant
- healthcare
- dna methylation
- electronic health record
- big data
- machine learning
- small molecule
- mass spectrometry
- deep learning
- heat stress
- social media
- heat shock protein
- single molecule