A comparison of methods for estimating substitution rates from ancient DNA sequence data.
K Jun TongDavid A DuchêneSebastián DuchêneJemma L GeogheganSimon Y W HoPublished in: BMC evolutionary biology (2018)
We recommend that phylogenetic studies of ancient DNA sequences should use multiple methods of inference and test for the presence of temporal signal, among-lineage rate variation, and phylo-temporal clustering in the data.