A role for arthropods as vectors of multidrug-resistant Enterobacterales in surgical site infections from South Asia.
Brekhna HassanMuhammad IjazAsadullah KhanKirsty SandsGeorgios-Ion SerfasLiam ClayfieldMaisra Mohammed El-BousearyGiulia LaiEdward PortalAfifah KhanWilliam J WatkinsJulian ParkhillTimothy Rutland WalshPublished in: Nature microbiology (2021)
Understanding how multidrug-resistant Enterobacterales (MDRE) are transmitted in low- and middle-income countries (LMICs) is critical for implementing robust policies to curb the increasing burden of antimicrobial resistance (AMR). Here, we analysed samples from surgical site infections (SSIs), hospital surfaces (HSs) and arthropods (summer and winter 2016) to investigate the incidence and transmission of MDRE in a public hospital in Pakistan. We investigated Enterobacterales containing resistance genes (blaCTX-M-15, blaNDM and blaOXA-48-like) for identification, antimicrobial susceptibility testing and whole-genome sequencing. Genotypes, phylogenetic relationships and transmission events for isolates from different sources were investigated using single-nucleotide polymorphism (SNP) analysis with a cut-off of ≤20 SNPs. Escherichia coli (14.3%), Klebsiella pneumoniae (10.9%) and Enterobacter cloacae (16.3%) were the main MDRE species isolated. The carbapenemase gene blaNDM was most commonly detected, with 15.5%, 15.1% and 13.3% of samples positive in SSIs, HSs and arthropods, respectively. SNP (≤20) and spatiotemporal analysis revealed linkages in bacteria between SSIs, HSs and arthropods supporting the One Health approach to underpin infection control policies across LMICs and control AMR.
Keyphrases
- klebsiella pneumoniae
- multidrug resistant
- escherichia coli
- genome wide
- antimicrobial resistance
- drug resistant
- acinetobacter baumannii
- gram negative
- healthcare
- public health
- mental health
- genetic diversity
- dna methylation
- adverse drug
- gene expression
- biofilm formation
- copy number
- social media
- heat stress
- cystic fibrosis
- acute care
- atomic force microscopy
- drinking water
- quality improvement
- mass spectrometry
- pseudomonas aeruginosa
- bioinformatics analysis