Additional Sex Combs-like Family Associated with Epigenetic Regulation.
Nackhyoung KimSukyoung ByunSoo-Jong UmPublished in: International journal of molecular sciences (2024)
The additional sex combs-like (ASXL) family, a mammalian homolog of the additional sex combs ( Asx ) of Drosophila , has been implicated in transcriptional regulation via chromatin modifications. Abnormal expression of ASXL family genes leads to myelodysplastic syndromes and various types of leukemia. De novo mutation of these genes also causes developmental disorders. Genes in this family and their neighbor genes are evolutionary conserved in humans and mice. This review provides a comprehensive summary of epigenetic regulations associated with ASXL family genes. Their expression is commonly regulated by DNA methylation at CpG islands preceding transcription starting sites. Their proteins primarily engage in histone tail modifications through interactions with chromatin regulators (PRC2, TrxG, PR-DUB, SRC1, HP1α, and BET proteins) and with transcription factors, including nuclear hormone receptors (RAR, PPAR, ER, and LXR). Histone modifications associated with these factors include histone H3K9 acetylation and methylation, H3K4 methylation, H3K27 methylation, and H2AK119 deubiquitination. Recently, non-coding RNAs have been identified following mutations in the ASXL1 or ASXL3 gene, along with circular ASXLs and microRNAs that regulate ASXL1 expression. The diverse epigenetic regulations linked to ASXL family genes collectively contribute to tumor suppression and developmental processes. Our understanding of ASXL-regulated epigenetics may provide insights into the development of therapeutic epigenetic drugs.
Keyphrases
- genome wide
- dna methylation
- transcription factor
- gene expression
- copy number
- genome wide identification
- poor prognosis
- acute myeloid leukemia
- dna damage
- bioinformatics analysis
- oxidative stress
- genome wide analysis
- adipose tissue
- long non coding rna
- dna binding
- breast cancer cells
- metabolic syndrome
- estrogen receptor