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Epigenetic Reprogramming Drives Epithelial Disruption in COPD.

Bonnie H Yeung-LukAra WallyCarter SwabySofia JaureguiEsther LeeRachel ZhangDaniel ChenSean H LukNisha UpadyaEthan TiengKai WilmsenEthan ShermanDheeksha SudhakarMatthew LukAbhishek Kumar ShrivastavShuo CaoBaishakhi GhoshStephanie A ChristensonYvonne Jean HuangVictor E OrtegaShyam BiswalWan-Yee TangVenkataramana K Sidhaye
Published in: American journal of respiratory cell and molecular biology (2023)
Chronic obstructive pulmonary disease (COPD) remains a major public health challenge that contributes greatly to mortality and morbidity worldwide. Although it has long been recognized that the epithelium is altered in COPD, there has been little focus on targeting it to modify the disease course. Therefore, mechanisms that disrupt epithelial cell function in COPD patients are poorly understood. In this study, we sought to determine if epigenetic reprogramming of the cell-cell adhesion molecule E-cadherin, encoded by the CDH1 gene, disrupts epithelial integrity, and by reducing these epigenetic marks, we can restore epithelial integrity and rescue alveolar airspace destruction. We used differentiated normal and COPD-derived primary human airway epithelial cells, genetically manipulated mouse tracheal epithelial cells, and mouse and human precision-cut lung slices to assess the effects of epigenetic reprogramming. We show that the loss of CDH1 in COPD is due to increased DNA methylation site at the CDH1 enhancer D through the downregulation of the ten-eleven translocase methylcytosine dioxygenase (TET) enzyme, TET1 . Increased DNA methylation at the enhancer D region decreases the enrichment of RNA polymerase II binding. Remarkably, treatment of human precision-cut slices derived from COPD patients with the DNA demethylation agent, 5-aza-2'-deoxycytidine, decreased cell damage and reduced air space enlargement in the diseased tissue. Here, we present a novel mechanism that targets epigenetic modifications to reverse the tissue remodeling in human COPD lungs and serves as a proof of concept for developing a disease-modifying target.
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