Metabolomics Analysis of PK-15 Cells with Pseudorabies Virus Infection Based on UHPLC-QE-MS.
Panrao LiuDanhe HuLili YuanZhengmin LianXiaohui YaoZhenbang ZhuXiangdong LiPublished in: Viruses (2022)
Viruses depend on the metabolic mechanisms of the host to support viral replication. We utilize an approach based on ultra-high-performance liquid chromatography/Q Exactive HF-X Hybrid Quadrupole-Orbitrap Mass (UHPLC-QE-MS) to analyze the metabolic changes in PK-15 cells induced by the infections of the pseudorabies virus (PRV) variant strain and Bartha K61 strain. Infections with PRV markedly changed lots of metabolites, when compared to the uninfected cell group. Additionally, most of the differentially expressed metabolites belonged to glycerophospholipid metabolism, sphingolipid metabolism, purine metabolism, and pyrimidine metabolism. Lipid metabolites account for the highest proportion (around 35%). The results suggest that those alterations may be in favor of virion formation and genome amplification to promote PRV replication. Different PRV strains showed similar results. An understanding of PRV-induced metabolic reprogramming will provide valuable information for further studies on PRV pathogenesis and the development of antiviral therapy strategies.
Keyphrases
- ms ms
- ultra high performance liquid chromatography
- tandem mass spectrometry
- mass spectrometry
- liquid chromatography
- high resolution mass spectrometry
- simultaneous determination
- induced apoptosis
- high performance liquid chromatography
- gas chromatography
- cell cycle arrest
- solid phase extraction
- high resolution
- single cell
- escherichia coli
- oxidative stress
- healthcare
- sars cov
- gene expression
- fatty acid
- health information
- dna methylation
- social media
- drug induced
- genome wide