MitoHiFi: a python pipeline for mitochondrial genome assembly from PacBio high fidelity reads.

Marcela Uliano-Silva João Gabriel R N FerreiraKsenia Krasheninnikovanull nullGiulio Formenti Linelle Abueg James W Torrance Eugene W Myers Richard Durbin Mark L Blaxter Shane A McCarthy

Published in: BMC bioinformatics (2023)

MitoHiFi is able to assemble mitochondrial genomes from a wide phylogenetic range of taxa from Pacbio HiFi data. MitoHiFi is written in python and is freely available on GitHub ( https://github.com/marcelauliano/MitoHiFi ). MitoHiFi is available with its dependencies as a Docker container on GitHub (ghcr.io/marcelauliano/mitohifi:master).

Keyphrases

oxidative stress
electronic health record
big data
genome wide
machine learning
deep learning
artificial intelligence
data analysis