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Comparative genomics reveals signature regions used to develop a robust and sensitive multiplex TaqMan real-time qPCR assay to detect the genus Dickeya and Dickeya dianthicola.

Shefali DobhalG BolukB BablerM J StulbergJ RascoeM K NakhlaT A ChapmanA B CrockfordM J MelzerA M AlvarezMohammad Arif
Published in: Journal of applied microbiology (2020)
The developed assay will serve as a practical tool for screening of propagative material, monitoring the presence and distribution, and quantification of target pathogens in a breeding programme. The assay also has applications in routine diagnostics, biosecurity and microbial forensics.
Keyphrases
  • high throughput
  • single cell
  • real time pcr
  • microbial community
  • randomized controlled trial
  • study protocol
  • clinical trial