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Survey of the Endophytic Bacteria Inhabiting Wild Daucus Seed Using 16S rRNA Gene Amplicon Sequencing.

Sandeep KumarLinda J JohnsonSuliana TeasdaleYulia MorozovaAnouck C M de BonthRuy JaureguiRina HannafordStuart D Card
Published in: Microbiology resource announcements (2023)
We report a preliminary survey of the endophytic bacterial microbiota of seed from wild carrot (Daucus carota) using 16S rRNA gene amplicon sequencing. Actinobacteria , Bacteroidetes , Firmicutes , and Proteobacteria were the most abundant phyla detected, while Bacillus , Massilia , Paenibacillus , Pantoea , Pseudomonas, Rhizobium , Sphingomonas , and Xanthomonas were the most abundant genera.
Keyphrases
  • single cell
  • cross sectional
  • copy number
  • genome wide
  • genome wide identification
  • dna methylation
  • transcription factor
  • escherichia coli
  • genetic diversity
  • gene expression
  • pseudomonas aeruginosa
  • cystic fibrosis