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Structure and transcriptional regulation of the major intrinsic protein gene family in grapevine.

Darren Chern Jan WongLi ZhangIsabelle MerlinSimone D CastellarinGregory Alan Gambetta
Published in: BMC genomics (2018)
Combining phylogenetic analyses, gene expression profiling, gene co-expression network analyses, and cis-regulatory element enrichment, this study provides a comprehensive overview of the structure and transcriptional regulation of the grapevine MIP family. The study highlights the duplication and sub-functionalization of the family, its strong coordinated expression with genes involved in growth and transport, and the putative classes of TFs responsible for its regulation.
Keyphrases
  • poor prognosis
  • genome wide
  • copy number
  • genome wide identification
  • transcription factor
  • binding protein
  • dna methylation
  • long non coding rna