Distinct Expression Patterns of Genes Coding for Biological Response Modifiers Involved in Inflammatory Responses and Development of Fibrosis in Chronic Hepatitis C: Upregulation of SMAD-6 and MMP-8 and Downregulation of CAV-1, CTGF, CEBPB, PLG, TIMP-3, MMP-1, ITGA-1, ITGA-2 and LOX.
Leona RadmanicPetra KoraćLana GorenecPetra SimicicKristian BodulićAdriana VinceSnjezana Zidovec LepejPublished in: Medicina (Kaunas, Lithuania) (2022)
Background and Objectives : The aim of this study was to analyze the expression of genes on transcriptomic levels involved in inflammatory immune responses and the development of fibrosis in patients with chronic hepatitis C. Materials and Methods : Expression patterns of 84 selected genes were analyzed with real-time quantitative RT PCR arrays in the peripheral blood of treatment-naive patients with chronic hepatitis C and healthy controls. The panel included pro- and anti-fibrotic genes, genes coding for extracellular matrix (EMC) structural constituents and remodeling enzymes, cell adhesion molecules, inflammatory cytokines, chemokines and growth factors, signal transduction members of the transforming growth factor- beta (TGF-ß) superfamily, transcription factors, and genes involved in epithelial to mesenchymal transition. Results : The expression of SMAD-6 coding for a signal transduction TGF-beta superfamily member as well as MMP-8 coding for an ECM protein were significantly increased in CHC patients compared with controls. Conclusions : Chronic hepatitis C was also characterized by a significant downregulation of a set of genes including CAV-1, CTGF, TIMP-3, MMP-1, ITGA-1, LOX, ITGA-2, PLG and CEBPB encoding various biological response modifiers and transcription factors. Our results suggest that chronic hepatitis C is associated with distinct patterns of gene expression modulation in pathways associated with the regulation of immune responses and development of fibrosis.
Keyphrases
- transforming growth factor
- genome wide identification
- poor prognosis
- genome wide
- transcription factor
- liver fibrosis
- epithelial mesenchymal transition
- immune response
- extracellular matrix
- gene expression
- bioinformatics analysis
- peripheral blood
- cell proliferation
- binding protein
- signaling pathway
- dna methylation
- long non coding rna
- cell adhesion
- end stage renal disease
- genome wide analysis
- ejection fraction
- cell migration
- peritoneal dialysis
- systemic sclerosis
- inflammatory response
- dendritic cells
- dna binding