Reproducible proteomics sample preparation for single FFPE tissue slices using acid-labile surfactant and direct trypsinization.
Melanie Christine FöllMatthias FahrnerVictor Oginga OriaMarkus KühsMartin Lothar BiniossekMartin WernerPeter BronsertOliver SchillingPublished in: Clinical proteomics (2018)
In essence, the DTR protocol can keep up with the FASP protocol in terms of qualitative and quantitative reproducibility and performed almost as well in terms of proteome coverage and missed cleavages. We highlight the suitability of the DTR protocol as a viable and straightforward alternative to the FASP protocol for proteomics-based clinical research.