Revisiting Concurrent Radiation Therapy, Temozolomide, and the Histone Deacetylase Inhibitor Valproic Acid for Patients with Glioblastoma-Proteomic Alteration and Comparison Analysis with the Standard-of-Care Chemoirradiation.
Andra Valentina KrauzeYingdong ZhaoMing-Chung LiJoanna ShihWill JiangErdal TasciTheresa Cooley ZgelaMary SproullMegan MackeyUma ShankavaramPhilip TofilonKevin CamphausenPublished in: Biomolecules (2023)
Differential alteration in proteomic expression pre- vs. post-completion of concurrent chemoirradiation (CRT) is present with the addition of VPA. Using pre- vs. post-data, prognostic proteins emerged in the analysis. Using pre-CRT data, potentially predictive proteins were identified. The protein signals and hallmark gene sets associated with the alteration in the proteome identified between patients who received VPA and those who did not, align with known biological mechanisms of action of VPA and may allow for the identification of novel biomarkers associated with outcomes that can help advance the study of VPA in future prospective trials.
Keyphrases
- histone deacetylase
- radiation therapy
- locally advanced
- electronic health record
- healthcare
- poor prognosis
- big data
- cardiac resynchronization therapy
- palliative care
- label free
- heart failure
- squamous cell carcinoma
- atrial fibrillation
- copy number
- quality improvement
- genome wide
- dna methylation
- type diabetes
- adipose tissue
- skeletal muscle
- machine learning
- gene expression
- radiation induced
- protein protein
- newly diagnosed
- insulin resistance
- left ventricular
- deep learning
- amino acid
- glycemic control