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Crystal structure of adenosine A 2A receptor in complex with clinical candidate Etrumadenant reveals unprecedented antagonist interaction.

Tobias ClaffJonathan G SchlegelJan Hendrik VoßVictoria J VaaßenRenato H WeißeRobert K Y ChengSandra Markovic-MuellerDenis BucherNorbert SträterChrista Elisabeth Müller
Published in: Communications chemistry (2023)
The G s  protein-coupled adenosine A 2A receptor (A 2A AR) represents an emerging drug target for cancer immunotherapy. The clinical candidate Etrumadenant was developed as an A 2A AR antagonist with ancillary blockade of the A 2B AR subtype. It constitutes a unique chemotype featuring a poly-substituted 2-amino-4-phenyl-6-triazolylpyrimidine core structure. Herein, we report two crystal structures of the A 2A AR in complex with Etrumadenant, obtained with differently thermostabilized A 2A AR constructs. This led to the discovery of an unprecedented interaction, a hydrogen bond of T88 3.36 with the cyano group of Etrumadenant. T88 3.36 is mutated in most A 2A AR constructs used for crystallization, which has prevented the discovery of its interactions. In-vitro characterization of Etrumadenant indicated low selectivity versus the A 1 AR subtype, which can be rationalized by the structural data. These results will facilitate the future design of AR antagonists with desired selectivity. Moreover, they highlight the advantages of the employed A 2A AR crystallization construct that is devoid of ligand binding site mutations.
Keyphrases
  • small molecule
  • high throughput
  • current status
  • binding protein
  • artificial intelligence
  • protein kinase
  • deep learning
  • light emitting