Role of the redox state of the Pirin-bound cofactor on interaction with the master regulators of inflammation and other pathways.
Tamim AhsanSabrina Samad ShoilyTasnim AhmedAbu Ashfaqur SajibPublished in: PloS one (2023)
Persistent cellular stress induced perpetuation and uncontrolled amplification of inflammatory response results in a shift from tissue repair toward collateral damage, significant alterations of tissue functions, and derangements of homeostasis which in turn can lead to a large number of acute and chronic pathological conditions, such as chronic heart failure, atherosclerosis, myocardial infarction, neurodegenerative diseases, diabetes, rheumatoid arthritis, and cancer. Keeping the vital role of balanced inflammation in maintaining tissue integrity in mind, the way to combating inflammatory diseases may be through identification and characterization of mediators of inflammation that can be targeted without hampering normal body function. Pirin (PIR) is a non-heme iron containing protein having two different conformations depending on the oxidation state of the iron. Through exploration of the Pirin interactome and using molecular docking approaches, we identified that the Fe2+-bound Pirin directly interacts with BCL3, NFKBIA, NFIX and SMAD9 with more resemblance to the native binding pose and higher affinity than the Fe3+-bound form. In addition, Pirin appears to have a function in the regulation of inflammation, the transition between the canonical and non-canonical NF-κB pathways, and the remodeling of the actin cytoskeleton. Moreover, Pirin signaling appears to have a critical role in tumor invasion and metastasis, as well as metabolic and neuro-pathological complications. There are regulatory variants in PIR that can influence expression of not only PIR but also other genes, including VEGFD and ACE2. Disparity exists between South Asian and European populations in the frequencies of variant alleles at some of these regulatory loci that may lead to differential occurrence of Pirin-mediated pathogenic conditions.
Keyphrases
- oxidative stress
- molecular docking
- stress induced
- rheumatoid arthritis
- inflammatory response
- transcription factor
- cardiovascular disease
- binding protein
- type diabetes
- liver failure
- genome wide
- molecular dynamics simulations
- lps induced
- poor prognosis
- heart failure
- immune response
- copy number
- risk assessment
- cancer therapy
- lipopolysaccharide induced
- drug induced
- cell migration
- metabolic syndrome
- ejection fraction
- sensitive detection
- hepatitis b virus
- risk factors
- nuclear factor
- respiratory failure
- squamous cell carcinoma
- systemic lupus erythematosus
- drug delivery
- atrial fibrillation
- disease activity
- childhood cancer
- visible light
- adipose tissue
- living cells
- systemic sclerosis
- dna methylation
- genome wide association study